Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56412g00001 ATGATCCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGGCTGAAGCAGCCAGAGGTTTAGACTTAAAAGTTCAACCATTTCTTGATCGAACCATACTCAAATCGCGCAATCCTCCCAAAATAGAATTCCAACACCACGAATTCGACCAACTCGAAGATCTATCAAACTCCGAAAAAATCTACGAAGGAGAGAAAATCATCCATAAATCCTTCTTTTTCAATCCCGAAAAGCTTGATTCGCTCAAGAAAAAGGCGACAGAAGACGGAGTTTTAAAAAAATGTTCAACTTTCGAAGCACTCTCGGCTTTTGTATGGAGAGCTAGAACTTCAGCTTTAGAAATGCATCCTAATCAACAAACGAAATTACTTTTCGCAGTTGATGGACGGTCGAGATTCGTTCCGCCAATACCAAAGGGATATTTTGGCAATGCTATTGTGCTAACAAATTCTTTGTGTAAAGCAAGTGATTTATTGGAGAACCCTTTTTCATATTCAGTTGGATTGGTTCACAAGGCAATTGAAATGGTTACAGATAGTTATATGAGATCAGCTATTGATTATTTTGAGGTTACAAGAGCTAGGCCTTCTTTAACAGGAACACTTTTGATTACAACATGGACTAAATTGTCTTTTGACACTACTGATTTTGGTTGGGGTGAACCTTTGTGTTCTGGTCCTGTTACATTGCCAGATAAAGAAGTGATTTTGTTCTTGTCACATGGTCAAGGAAGGAAAGGTATAAGTGTTCTTCTTGGTTTKCCTGATTCTGCTATGAAACGTTTTGAAGAATTGGTGATTAATATGGTGTGA 825 0.3818 MIHCMKDGLCAMEFVNAWAEAARGLDLKVQPFLDRTILKSRNPPKIEFQHHEFDQLEDLSNSEKIYEGEKIIHKSFFFNPEKLDSLKKKATEDGVLKKCSTFEALSAFVWRARTSALEMHPNQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCKASDLLENPFSYSVGLVHKAIEMVTDSYMRSAIDYFEVTRARPSLTGTLLITTWTKLSFDTTDFGWGEPLCSGPVTLPDKEVILFLSHGQGRKGISVLLGXPDSAMKRFEELVINMV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56412g00001 274 Gene3D - 55 272 IPR023213 -
Trme56412g00001 274 FunFam Tryptamine hydroxycinnamoyl transferase 57 271 - -
Trme56412g00001 274 Gene3D - 1 54 IPR023213 -
Trme56412g00001 274 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 269 - -
Trme56412g00001 274 Pfam Transferase family 3 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56412g00001 Trme-Chr56412 4 828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56412g00001 1 273 Monolignol Biosynthesis Gene Families AT5G48930 34.965 4.16e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56412g00001 K15400 - gmx:100794490 455.292