Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56397g00001 ATGGATCCAATTCCAACCTATCCAGAAATCTCCATAGATGTTCCTCCTTACCTTCGTGTACACAAAAACGGAACCATAGAAAGATTAGCAGGCATTCATGTCGTTCCTCCCGGCATCGATCCTCAAACCAAAGTTATCTCCAAAGACATCACAATCATCCCAAAAACTGGTCTCACAGCAAGACTCTATTCACCCAACAATTCCACTTCAAAAAAACTACCTTTAATTATCTACTTCCATGGTGGAGCCTATTGTATATCTTCAGCCTCTGACCCACTTTACCATAACTCCCTCAACAAACTCGT 305 0.4164 MDPIPTYPEISIDVPPYLRVHKNGTIERLAGIHVVPPGIDPQTKVISKDITIIPKTGLTARLYSPNNSTSKKLPLIIYFHGGAYCISSASDPLYHNSLNKLV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56397g00001 102 Gene3D alpha/beta hydrolase 17 102 IPR029058 -
Trme56397g00001 102 PANTHER ARYLACETAMIDE DEACETYLASE 13 101 - -
Trme56397g00001 102 SUPERFAMILY alpha/beta-Hydrolases 5 100 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56397g00001 Trme-Chr56397 1 305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56397g00001 16 102 Carbohydrate Esterase AT1G49640 44.565 6.09e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56397g00001 - - gmx:100786377 149.828