Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56327g00001 ATGAATTTCAAATCAGATTATAAAGTAATAATTCTTTATGAGGTCGACAAAGCTGTAGAGAACATCCAACACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTCTGCTGTGAAGATGATGAAAACATAATTGTACCTGTGAAAACCCGGTTCAAAGTTATCAATGTTGATGCTCCTCAAACTCATGAAATTATTGAGGCTCTTACTCAGATAGCAAATAAAGAGGAAATTGATCTATCCATGAATTTTGCTATGAAGATTGCTACAAAATCTAAGCAGAACCTCAGGGAAGCAATCTTGGCTCTTGAAGCATGCAAAGCACACAA 344 0.3488 MNFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDICKLVLCCEDDENIIVPVKTRFKVINVDAPQTHEIIEALTQIANKEEIDLSMNFAMKIATKSKQNLREAILALEACKAH 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56327g00001 114 Gene3D - 67 114 - -
Trme56327g00001 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 109 IPR027417 -
Trme56327g00001 114 Gene3D - 1 65 IPR027417 -
Trme56327g00001 114 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 4 113 - -
Trme56327g00001 114 FunFam replication factor C subunit 3 66 114 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56327g00001 4 112 Core DNA Replication Machinery Family AT5G27740 39.450 7.89e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56327g00001 K10756 - mtr:11405660 196.438