Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme563233g00001 ATGAGCATTAGAAGGAAGAGCAACAACGAGAGTGTTGCAAAGCGTGACATTACTATTGCTGATGAAAGCAAGAAGACGGTTGTTGTGTCTTTGTGGGGTGATCTTGCAACTAACATAGGACAAGAGTTACTTGACATTGCTGATA 145 0.4138 MSIRRKSNNESVAKRDITIADESKKTVVVSLWGDLATNIGQELLDIAD 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme563233g00001 48 Pfam Replication protein A OB domain 2 40 IPR031657 -
Trme563233g00001 48 Gene3D - 1 48 IPR012340 -
Trme563233g00001 48 SUPERFAMILY Nucleic acid-binding proteins 2 40 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme563233g00001 Trme-Chr563233 1 240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme563233g00001 1 48 Core DNA Replication Machinery Family AT5G08020 79.167 6.57e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme563233g00001 K07466 - tpra:123923087 92.4337