Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56111g00001 GCTGCAAAGGAGTGCAGAATAATTGTGGATACAATTGAATCAGCTCTTCCTAATGGAATGCCTGATGGAATAGGTGAAGATTGTAAGTTGCAGGAATGGTTTCACAGAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGATGAAGCTGTCACTGCTTATCGGCGTGCTCTGGTCAAGCCATGGAATTTGGAGCCGAGGAGGTTGGCATGTCTACAAAAGGATTTAGCTACCACACTACTCTATGGTGGTGTTGAAGTAAACCTACCTTCTCACTTGCAAGTGAATGGTCCAACAACACCAATGAGTAACATTGAAGAAGCGATACTTTTGTTATTGATACTATCAGGAAAGATGG 370 0.427 AAKECRIIVDTIESALPNGMPDGIGEDCKLQEWFHRALELLPNLWIKAGFLDEAVTAYRRALVKPWNLEPRRLACLQKDLATTLLYGGVEVNLPSHLQVNGPTTPMSNIEEAILLLLILSGKM 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56111g00001 123 PANTHER PROTEIN NPG1 1 123 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56111g00001 Trme-Chr56111 541 910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56111g00001 1 123 Calmodulin-binding Proteins AT1G27460 55.285 2.42e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56111g00001 K21843 - gmx:100795958 208.764