Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5610g00001 ATGGTGGATGACAATGGCTGTGGGTTTAGTGGAAGAAAGGATGCCGNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTCAGATCCTGTTACTGGAACGCTTATGGATGATGCAATGATATTACCTTGCGGACATTCATTTGGTGGAGGTGGAATTCAGCATGTTATTAGAATGGGCACTATCGTGGTGGAGCAGGGCGTTGCCACCACTGTGCTCCCTGGTACGTCATATATCGGGTGGTGCAGCCTCAGCCATCCGTTTTCACACTTCATGTGCGCAGTGTGCTACAGCACTGCAACAGGGAGGAAAGTGGTAGGAAAATCCCAGAAAATGGTGGGAACTTGGACTTTTTCACTGTTTCTCACAGCCTTCCTTCCCCCGCATACTCGCCCCACAATGGCAGAACTTCACAGGCTAGCTACCTCCTCCTGA 441 0.458 MVDDNGCGFSGRKDAXXXXXXXXXXXXXXSDPVTGTLMDDAMILPCGHSFGGGGIQHVIRMGTIVVEQGVATTVLPGTSYIGWCSLSHPFSHFMCAVCYSTATGRKVVGKSQKMVGTWTFSLFLTAFLPPHTRPTMAELHRLATSS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5610g00001 146 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 30 63 - -
Trme5610g00001 146 SUPERFAMILY RING/U-box 30 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5610g00001 4 61 Plant U-box Gene Family AT5G05230 54.237 4.53e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5610g00001 - - gmx:100786717 93.5893