Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme560g00001 ATGAGAACTGGAAGACCAATGATGAATCCACATGATGAGTATGAACTGGTCTATGTTATGTTGCAGAAACGATTGGAGCAGTTGCTAAGACACCAAAATCGTCTTCATCAATCATGGCCATGGATATTGCAAACTCTGAAACTGTCACCAACTCACCCCATCAGACTTGGTCTCACTCTGAACTTCTTGGTGTTCTATCCTGATTGTGCTTGCGGCATTGCAAAACAGTTGGATGGTTCTGATGCCGCAAGGGGAACTGTGAACCAGACTTGGAGCCAACCTGCAATAAAAGGCACTCCACCTACACCAAGGGACAGTCACACTTGCAGTGTCGTTGGTGATAGACTATTTGTGTTTGGGGGTACTGATGGAATGAATCCACTGAAGGATTTGCATATTTTAGACATTT 409 0.4425 MRTGRPMMNPHDEYELVYVMLQKRLEQLLRHQNRLHQSWPWILQTLKLSPTHPIRLGLTLNFLVFYPDCACGIAKQLDGSDAARGTVNQTWSQPAIKGTPPTPRDSHTCSVVGDRLFVFGGTDGMNPLKDLHILDI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme560g00001 136 Pfam Galactose oxidase, central domain 103 136 - -
Trme560g00001 136 Gene3D - 77 136 IPR015915 GO:0005515
Trme560g00001 136 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 87 136 - -
Trme560g00001 136 SUPERFAMILY 14-3-3 protein 44 77 IPR036815 -
Trme560g00001 136 SUPERFAMILY Kelch motif 88 135 IPR015915 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme560g00001 43 76 14-3-3 family AT5G38480 60.000 1.94e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme560g00001 - - qsu:111998399 103.219