Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56087g00001 GAATCAAGGAGTAAATCAAGTATCTGTGATCTTTGGAGGACGCATTCTAAAACGAACATTATGGATGAAACAATGGCGGCAAGATATTGGTGTCATGCTTGTTCTCAAATAGTTAGTCCCATAATGGGAATGGAGATGAAATGCCCAGTTTGTCAAGGTGGATTTGTTGAAGAAATGAGCAGTGCCACTGGTATTAGTGACTTGCCAAATATACCAGAACCTGATTTTGGATCGGATCGTTCTCCCTCTCTTTGGGCACCTATCTTGCTAGGTATGATGGGCAATCCGCGGCTTCGTCGAAGATTGAGACGTATAGAGCTTGAAGAAGACTATGATAGTGGTAATCGTGATGATGATAATGGTGGTGTAGGACATTATGATCGAGAGCTTGAGTCCATCCTTCGAAGGAGAAGAAGAAGCTCAGCTACCATTCAGCAATTGCTTCAAGGCATAAGAGCTGGACTGACATCTGAACCACAAGAGAATACTACTGACNNNNNNNNNNANNNNNNNNNNANNNNNNNNGAAAGAGAAAGAGAGCATGTAATCTTGATTAACCCTTTTAATCAGACTATTATAGTTCAAGGTTCCTATGATTCAAACCGGGATCAAAATGATAATCATAACCCCATTGGGTCTCTAGGTGACTATTTTGTAGGGCCTGGTTTGGATCTATTGTTGCAACATTTGTCTGAGAATGACCCTAATAGATATGGAACTCCACCTGCACCGAAGGAAGCCGTTGAAGCTCTACCTACTGTGAAGATCAATGAGAATTTGCAATGTTCTGTCTGTTTGGATGATTTTGAAGTTGGTTCTGAAGC 824 0.4017 ESRSKSSICDLWRTHSKTNIMDETMAARYWCHACSQIVSPIMGMEMKCPVCQGGFVEEMSSATGISDLPNIPEPDFGSDRSPSLWAPILLGMMGNPRLRRRLRRIELEEDYDSGNRDDDNGGVGHYDRELESILRRRRRSSATIQQLLQGIRAGLTSEPQENTTDXXXXXXXXXXEREREHVILINPFNQTIIVQGSYDSNRDQNDNHNPIGSLGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56087g00001 275 MobiDBLite consensus disorder prediction 150 164 - -
Trme56087g00001 275 MobiDBLite consensus disorder prediction 150 170 - -
Trme56087g00001 275 Pfam zinc-ribbon 28 59 IPR039525 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56087g00001 212 275 C3H Transcription Factor Family AT5G01980 37.681 2.71e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56087g00001 - K11982 gmx:100784876 325.094