Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme559953g00001 AGTGTTAGCAGCATCGAATTGGTACCTAATTTGGTGCTGAGGAAGTTGATTCAGCAATATTGTAATGTCAATGGAATTCCTAGTGGGGATTCGGGTCGTCGGAGTCGTGACATTACTAGGACGGCTGAGCCCGGAAGTGAGGCAGCAGAGGGAGCAATGAAACTCTTGGCTGATTTTCTTTGTGAAAGTCTTGACAATGGAAATGTAGAGCAGAAGAACCATGCTGCATTTGAGATAAGG 240 0.4542 SVSSIELVPNLVLRKLIQQYCNVNGIPSGDSGRRSRDITRTAEPGSEAAEGAMKLLADFLCESLDNGNVEQKNHAAFEIR 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme559953g00001 80 MobiDBLite consensus disorder prediction 25 47 - -
Trme559953g00001 80 ProSiteProfiles U-box domain profile. 1 27 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme559953g00001 2 80 U-box Gene Family AT1G10560 41.772 6.23e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme559953g00001 - - gmx:100795816 97.4413