Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55972g00001 ATGGGGCAAGTTTGCATGTCAACAACTGAGGTAGCATCCTACATCATAGATGCTCATTTATGGGGTTTCAGGGAGGCCTGTGTCGAGCATCACTTACAACATGGTCAAGGTGTTGCGGGGAGGGCTTTTTTGTCTCAAAACATGAGCTTCTGCTCAAACATTGCACAATTCTGCAAAACAGATTACCCTTTGGTTCATTATGCTCTCATGTTTGGGTTAACAGGCTGTTTTGCGATCTGTTTGCGGAGTTTTTATACAGGAGATGATGATTATGTGTTAGAGTTTTTTCTGCCTCCTGGGATCACAGAATTTCATGAACAGAAGACGCTCTTGGGATCCATATTGGCAACAATGAAAGAACATTTTCAGAGTCTTAAGATTGCTGCTGGTGTTGAACTTG 400 0.425 MGQVCMSTTEVASYIIDAHLWGFREACVEHHLQHGQGVAGRAFLSQNMSFCSNIAQFCKTDYPLVHYALMFGLTGCFAICLRSFYTGDDDYVLEFFLPPGITEFHEQKTLLGSILATMKEHFQSLKIAAGVEL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55972g00001 133 PANTHER PROTEIN NLP8 1 133 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55972g00001 Trme-Chr55972 1 400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55972g00001 1 133 NLP Transcription Factor Family AT4G24020 69.925 2.61e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55972g00001 - - gmx:100786118 244.202