Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55947g00001 ATGGGTGCTGTTGAAACACTCATTGTATGGGAGAATTTGGATATTAATAGGTATGTGCTGAAAAATGCTACCACTGGTGAGATTGTAATAAAGCATTTGAAGAAGGACCAAGAAGCTGATCAAAGCAACTTCCGTGATGCGGCTACCAATGCAGACTTGGAGGTTCAGGAGAAGATGCCATTACTTGAATGGTTTGCGAATGAGTACAAAAAATTCGGATGCTCGCTGGAATTTGTGACCAACAAATCTCAAGAAGGTTCACAGTTTTGCAGGGGGTTTGGTGGTATTGGAGGTATGCTTCGCTACCAGCTTGATATCAGATCATTTGATGAGTTATCTGATGATGATGGTGGAGTGTACGAGGATTCCGATTAA 375 0.4187 MGAVETLIVWENLDINRYVLKNATTGEIVIKHLKKDQEADQSNFRDAATNADLEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIRSFDELSDDDGGVYEDSD 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55947g00001 124 Gene3D - 1 124 IPR029064 -
Trme55947g00001 124 FunFam Peptide chain release factor subunit 1 1 124 - -
Trme55947g00001 124 SUPERFAMILY L30e-like 1 106 IPR029064 -
Trme55947g00001 124 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 115 IPR004403 GO:0003747|GO:0006415
Trme55947g00001 124 Pfam eRF1 domain 3 1 104 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55947g00001 Trme-Chr55947 421 795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55947g00001 1 124 Eukaryotic Initiation Factors Gene Family AT3G26618 87.097 1.86e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55947g00001 K03265 - qsa:O6P43_006130 231.106