Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5593g00001 GAAGTAGTTGGTATATCTATTGTAGTCCTGGTGGCTTTGTTCAGCATTCAACGATTTGGTACCGGTAAAGTGGGTTTCATGTTTGCCCCCGTACTTGCTTTATGGTTCTTTTCTCTAGGTTCTATTGGAATATATAATATACTCAAATACGATATTACTGTTGTAAGAGCACTCAACCCAGCATATATCTATTATTTCTTCAAGAATAATGGCAAAAGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTTTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTTGGACATTTTTCTGTACCGGCAATACAGATTGCCTTCACCTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTCTGATGAAAAACCCCGCTTCTTATTCGAGCGTTTTCTACAAATCTGTTCCAGAGTCTTTTCTGGCCAGTGTTCGTTATAGCCACACTTGGTGCTATGATTGCAAGCCAAGCAATGATTTCTGCTACATTTTCATGCGTCAAGCAATCGATGGCTTTGGGATGCTTCCCTAG 546 0.4139 EVVGISIVVLVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGIYNILKYDITVVRALNPAYIYYFFKNNGKSAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLMKNPASYSSVFYKSVPESFLASVRYSHTWCYDCKPSNDFCYIFMRQAIDGFGMLP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5593g00001 181 Pfam K+ potassium transporter 2 146 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme5593g00001 181 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 146 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5593g00001 Trme-Chr5593 619 1918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5593g00001 6 145 Inorganic Solute Cotransporters AT1G60160 80.000 1.18e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5593g00001 K03549 - gmx:100814419 277.33