Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55937g00001 ATGCAACAAAAGGGAGTGGTTCCAGATTTTGTTCTATGCATTGGAGATGACAGATCAGATGAAGACATGTTCGGGGTAATAACGAGTGCAAGGGCATCGCTATCGCCTATTGCAGATGTTTTTCCTTGTACAGTTGGTCAGAAACCAAGCAAGGCCAAATATTACTTGGAAGACACAAGTGAGATATTGAGGATGTTGCAGGGTCTTGCCAATGCTTCTGAGCAAACTGCTGCTAGAAATTCTTCTAAGTTTCCTCATCATTAA 264 0.4205 MQQKGVVPDFVLCIGDDRSDEDMFGVITSARASLSPIADVFPCTVGQKPSKAKYYLEDTSEILRMLQGLANASEQTAARNSSKFPHH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55937g00001 87 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 1 83 - -
Trme55937g00001 87 Pfam Trehalose-phosphatase 2 60 IPR003337 GO:0003824|GO:0005992
Trme55937g00001 87 Gene3D - 1 86 IPR023214 -
Trme55937g00001 87 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 8 71 IPR001830 GO:0003824|GO:0005992
Trme55937g00001 87 SUPERFAMILY HAD-like 5 70 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55937g00001 Trme-Chr55937 407 670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55937g00001 1 70 Trehalose Biosynthesis Gene Families AT4G17770 70.833 9.30e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55937g00001 K16055 - gmx:100782799 142.51