Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55935g00001 ATGCCGGAGCGTGGGTCCCACCACCGTAGATCACACTCCGACACCACCTTCCGTTTCGCCGCCAACTTTGATGACCTTCTCCTCTTCGACCCATCCGACTTCGATATCTCCAATCTCCCACTCCCGTCCCCCGTCTCCGACGCCGTTCCGATGACCGTCGATTCAGACGAGTCAAACGGGAAGTCTACTTCGGCAGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTGGAGAAAATTGAAGAGAGGAAGGTGAATAGGCATAGGCATAGTAATTCGATGGATGGTTCTTCAACGACGTCGTTTGATGTTGATGATAATTCTATGGTGATGATTGATGGTGTGAAGAAATCTATGCCACCTGAGAAACTTGCTGAACTTGCTCTAATTGATCCTAAAAGAGCTAAAAGGTCAGTTAAGGTCAAAGTTAAGATTGAGTCAACCGGAGCACCCGGAGTTGCTGGAACAACTTTTAGTCAGATTTTTACTTAA 543 0.4015 MPERGSHHRRSHSDTTFRFAANFDDLLLFDPSDFDISNLPLPSPVSDAVPMTVDSDESNGKSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKIEERKVNRHRHSNSMDGSSTTSFDVDDNSMVMIDGVKKSMPPEKLAELALIDPKRAKRSVKVKVKIESTGAPGVAGTTFSQIFT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55935g00001 180 Coils Coil 95 100 - -
Trme55935g00001 180 MobiDBLite consensus disorder prediction 91 119 - -
Trme55935g00001 180 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 154 - -
Trme55935g00001 180 MobiDBLite consensus disorder prediction 39 69 - -
Trme55935g00001 180 MobiDBLite consensus disorder prediction 94 108 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55935g00001 1 154 bZIP Transcription Factor Family AT1G43700 36.612 2.07e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55935g00001 K20557 - gmx:778142 149.443