Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme558349g00001 ATGGTGTTAAGGAAAGTTGGTAAGTATGAAATTGGAAGAACCATTGGTGAAGGAACCTTCGCGAAGGTTAAATTCGCTCAGAATACTGAAACTGGTGAAAGTGTTGCTATGAAGATTCTCGATCGTAGCACCATCATCAAGCATAAAATGGCCGATCAG 159 0.4088 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKILDRSTIIKHKMADQ 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme558349g00001 53 ProSiteProfiles Protein kinase domain profile. 9 53 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme558349g00001 53 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 50 - -
Trme558349g00001 53 SUPERFAMILY Protein kinase-like (PK-like) 6 49 IPR011009 -
Trme558349g00001 53 Gene3D Phosphorylase Kinase; domain 1 2 53 - -
Trme558349g00001 53 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme558349g00001 Trme-Chr558349 12 170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme558349g00001 1 53 CBL-interacting serine-threonine protein kinases AT4G24400 90.566 8.14e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme558349g00001 - - pvy:116137704 104.375