Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55814g00001 TTATTGGAAGGTCACCATGCTTCTTTTGTGGAATCAGTACCAATTAGATACATAATCTTCTTCACAATATTCCAATGTGTGTATTTTATGGTTTGTTTTGGAGTGACATGGATTCCAATAGCTGGAATCTTGTTCCCTCTGCCTTTCTTCTTACTGATCTTGGTGAGGCAGTATATTCTCCCCAAGATGTTTAGTCCTCACCACCTAAGAGAACTTGATGCAGCTGAATATGAAGAAATTGTTGGTGCTCCAAGACTCTCATTAAGTGTATGCAATGCTTAA 282 0.383 LLEGHHASFVESVPIRYIIFFTIFQCVYFMVCFGVTWIPIAGILFPLPFFLLILVRQYILPKMFSPHHLRELDAAEYEEIVGAPRLSLSVCNA 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55814g00001 93 PANTHER ANION EXCHANGE PROTEIN 5 80 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55814g00001 Trme-Chr55814 199 480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55814g00001 1 90 Antiporters AT1G15460 66.667 1.35e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55814g00001 K24194 - gmx:100811184 145.591