Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55724g00001 GTGCTCAAGCTGGCTATCGACAGAGCTGCGTTCCCAGCAACTTTTGTCATACCAATGCAGCAAAAGTCATCTTCTATTAATCTAGACCACCTTGAAGAAAGATACACGGTTGGTGAAGCTTTATTCCAGCCATGTCTGTTGGGTTTAGAAGCTCACGGCATTGTTGAGCAGCTTGTCTGTGCTATTTCAAATGTATCATCTGATAATCATCGACAGCTGCTGGAAAATACAGTGGTTTGTGGTGGCACTTCTTCTATGATTGGTAAACTTTTCATCTTTGTTAGTTATGGTTAA 294 0.415 VLKLAIDRAAFPATFVIPMQQKSSSINLDHLEERYTVGEALFQPCLLGLEAHGIVEQLVCAISNVSSDNHRQLLENTVVCGGTSSMIGKLFIFVSYG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55724g00001 97 Gene3D - 4 89 - -
Trme55724g00001 97 PANTHER ACTIN 24 86 IPR004000 -
Trme55724g00001 97 SUPERFAMILY Actin-like ATPase domain 29 88 IPR043129 -
Trme55724g00001 97 Pfam Actin 14 88 IPR004000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55724g00001 33 88 Cytoskeleton Gene Families AT3G12110 41.071 7.41e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55724g00001 K16615 - gmx:100803056 105.531