Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55660g00001 AATGATGGTGGTGGTGGTGATGGAAAAAGGAGTAAGACAAGGAATGAGAGCAGTAAAGTTGAAGGAAAAGAAAACAGTTCAGGAAAGCATGCGGAAGAAACTAGTGATCAGCCAAATCCTAAGCAAGACTACATCCATGTCCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGTATTNTTCTACTTCCTCTTTCTCACTAACTACCCATTTTAA 231 0.4156 NDGGGGDGKRSKTRNESSKVEGKENSSGKHAEETSDQPNPKQDYIHVRARRGQATDSHSLAERVXFYFLFLTNYPF 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55660g00001 76 MobiDBLite consensus disorder prediction 1 57 - -
Trme55660g00001 76 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 12 64 IPR024097 GO:0006355
Trme55660g00001 76 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55660g00001 Trme-Chr55660 623 853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55660g00001 6 63 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.448 8.56e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55660g00001 - - psat:127119455 92.8189