Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55610g00001 CTTAAGCCTGAGGAAATAACTGCTATCAATAATGATTTTACTGAGCCTGGAACGCTTGCTCCAACTGGATTACATCTTGGTGGTACTAAGTATATGGTGATTCAAGGTGAACCTGGAGCTGTCATTCGAGGCAAGAAG 138 0.4275 LKPEEITAINNDFTEPGTLAPTGLHLGGTKYMVIQGEPGAVIRGKK 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55610g00001 46 Pfam Profilin 2 46 IPR005455 GO:0003779
Trme55610g00001 46 PRINTS Plant profilin signature 30 39 IPR005455 GO:0003779
Trme55610g00001 46 PRINTS Plant profilin signature 43 46 IPR005455 GO:0003779
Trme55610g00001 46 PRINTS Plant profilin signature 11 25 IPR005455 GO:0003779
Trme55610g00001 46 Gene3D Dynein light chain 2a, cytoplasmic 1 46 - -
Trme55610g00001 46 PANTHER PROFILIN 1 46 IPR005455 GO:0003779
Trme55610g00001 46 SUPERFAMILY Profilin (actin-binding protein) 2 46 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55610g00001 Trme-Chr55610 166 303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55610g00001 1 46 Cytoskeleton Gene Families AT5G56600 80.435 1.14e-21 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55610g00001 K05759 - pvy:116113735 89.7373