Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme554605g00001 GACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAAGACAAGACTACCGGACAGAAGAACAAGATTACTATCACCAATGACAAGGGTAGGCTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCCGAAAAATACAAATCTGAAGATGAAGAGCATAAGAAGAAGGTGGAGGCCAAGAATGCATTGGAAAACTATGCATATAACATGAGGAACACCATCAAGGATGATAAAATTGCTGGCAAACTTGATTCGGAAGACAAGAAGA 271 0.4022 DIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKLDSEDKK 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme554605g00001 90 Gene3D - 61 90 IPR029048 -
Trme554605g00001 90 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 65 IPR029047 -
Trme554605g00001 90 Coils Coil 37 57 - -
Trme554605g00001 90 PANTHER HEAT SHOCK PROTEIN 70KDA 1 79 IPR013126 GO:0005524|GO:0140662
Trme554605g00001 90 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 60 IPR029047 -
Trme554605g00001 90 FunFam Protein CBG18239 4 60 - -
Trme554605g00001 90 Pfam Hsp70 protein 1 89 IPR013126 GO:0005524|GO:0140662
Trme554605g00001 90 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 59 90 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme554605g00001 Trme-Chr554605 1 271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme554605g00001 1 90 Calmodulin-binding Proteins AT3G12580 92.222 2.31e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme554605g00001 K03283 - fve:101305698 173.326