Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme553678g00001 TCTCAGACATTGATGGCTGGAAAAGGAGAGGCCCCCACTGTTGGAATCGACCTCGGCACCACATACTCCTGCGCTGGAGTGTGGCAGCACGACCGTGTCGAAATCATCGCCAACGAACATGGCAACCGAACCACCCCCTCTTACGTCGCTTTCACTGATTCTGAGCGCTTGATCGGTGATGCCGCCAAGAGCCAGGTCACAAGGAACTCCACCAACACCATCTTCGGTAGCATCACCATCCTTATTTAG 249 0.5462 SQTLMAGKGEAPTVGIDLGTTYSCAGVWQHDRVEIIANEHGNRTTPSYVAFTDSERLIGDAAKSQVTRNSTNTIFGSITILI 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme553678g00001 82 FunFam heat shock 70 kDa protein-like 7 80 - -
Trme553678g00001 82 PRINTS 70kDa heat shock protein signature 40 52 - -
Trme553678g00001 82 PRINTS 70kDa heat shock protein signature 62 70 - -
Trme553678g00001 82 PRINTS 70kDa heat shock protein signature 12 25 - -
Trme553678g00001 82 PANTHER HEAT SHOCK PROTEIN 70KDA 14 76 IPR013126 GO:0005524|GO:0140662
Trme553678g00001 82 ProSitePatterns Heat shock hsp70 proteins family signature 1. 16 23 IPR018181 -
Trme553678g00001 82 SUPERFAMILY Actin-like ATPase domain 13 77 IPR043129 -
Trme553678g00001 82 Gene3D - 2 79 - -
Trme553678g00001 82 Pfam Hsp70 protein 14 76 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme553678g00001 Trme-Chr553678 2 250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme553678g00001 5 75 Calmodulin-binding Proteins AT3G12580 84.507 3.19e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme553678g00001 K03283 - tpra:123922251 132.88