Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55336g00001 GATATAAAACCAGATAACCTTATACTGGATAAAAATGGTCATTTGAAGCTTTCAGACTTCGGCTTATGTAAGACTCTTGATGACAAGTATTCAACAATTTTATTGGAAAATGAAGATTTAATTGGTCAAGAGTCAACTAGTGAAACTGAAGGATATTTTGTATCCCCTTGGTTGATGCCAAAGGAACAACTACAACAGTGGAAACGTAATCGCCGTGCATTGGCATATTCAACGGTTGGAACTCTTGATTACATGGCTCCTGAAGTTTTGCTCAAGAAGGGGTATGGAATAGAGTGTGATTGGTGGTCTCTTGGGGCAATCTTGTATGAGATGCTTGTTGGATATCCTCCATTTTGTTCTGATGATCCAAGAATGACCTGCCGTAAG 387 0.3902 DIKPDNLILDKNGHLKLSDFGLCKTLDDKYSTILLENEDLIGQESTSETEGYFVSPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAILYEMLVGYPPFCSDDPRMTCRK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55336g00001 129 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 129 - -
Trme55336g00001 129 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Trme55336g00001 129 SUPERFAMILY Protein kinase-like (PK-like) 1 122 IPR011009 -
Trme55336g00001 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme55336g00001 129 Pfam Protein kinase domain 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme55336g00001 129 FunFam Probable serine/threonine-protein kinase cot-1 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55336g00001 Trme-Chr55336 161 862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55336g00001 1 129 AGC Kinase Gene Family AT5G09890 79.389 1.69e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme55336g00001 Pkinase 1.9e-23 CL0016