Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme55328g00001 | ATGCGGCCAGTTATACTATGGTCTGTAGCTCGATTACATGGAAAGCCTATCGATGAAGTTTGCATCCTTTGTGTAATTGTATGTGTTCTCCTCACTGCATTTATTAGTGAATTCATTGGACAGCATTTTGCTATGGGACCAATTCTTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGAACAAGTTTGATAGCGAAAATGGAGACGGTTACTTGTGGTTTTTTGTATCCAATCTACCTTGCTGTCAGTGGATTGCAGACTGATGTCTTCAAAATCAACATTCAGTCTACTTGGATTGTTACTATCATAGTTATAGCCGGTTTCGTGGTGAAGATCGGTGGTGTAATGTTGCCGGGTTATTATTACAATGTCCCCATGAAAGAATGTTTTATGATTGGGCTCCTTCTTAATGGAAGAGTGACTGCACGCTGTCAACCACATCAGTGGTTGTTCAATCAAATCAACCGGTCTGGTCTTGATTGTATGACCGCTGATGTGGCTGACTGCATTCAATCACGAGACTTTGA | 530 | 0.4189 | MRPVILWSVARLHGKPIDEVCILCVIVCVLLTAFISEFIGQHFAMGPILLGLVVPEGPPLGTSLIAKMETVTCGFLYPIYLAVSGLQTDVFKINIQSTWIVTIIVIAGFVVKIGGVMLPGYYYNVPMKECFMIGLLLNGRVTARCQPHQWLFNQINRSGLDCMTADVADCIQSRDF | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme55328g00001 | 176 | PANTHER | CATION/H + ANTIPORTER | 1 | 138 | - | - | |
| Trme55328g00001 | 176 | Pfam | Sodium/hydrogen exchanger family | 6 | 141 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 | |
| Trme55328g00001 | 176 | Gene3D | - | 1 | 144 | IPR038770 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme55328g00001 | Trme-Chr55328 | 1 | 830 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme55328g00001 | 1 | 137 | Antiporter Super Family | AT3G44910 | 37.589 | 4.30e-23 | 93.6 |