Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55328g00001 ATGCGGCCAGTTATACTATGGTCTGTAGCTCGATTACATGGAAAGCCTATCGATGAAGTTTGCATCCTTTGTGTAATTGTATGTGTTCTCCTCACTGCATTTATTAGTGAATTCATTGGACAGCATTTTGCTATGGGACCAATTCTTTTAGGCTTGGTTGTTCCTGAAGGGCCGCCTTTAGGAACAAGTTTGATAGCGAAAATGGAGACGGTTACTTGTGGTTTTTTGTATCCAATCTACCTTGCTGTCAGTGGATTGCAGACTGATGTCTTCAAAATCAACATTCAGTCTACTTGGATTGTTACTATCATAGTTATAGCCGGTTTCGTGGTGAAGATCGGTGGTGTAATGTTGCCGGGTTATTATTACAATGTCCCCATGAAAGAATGTTTTATGATTGGGCTCCTTCTTAATGGAAGAGTGACTGCACGCTGTCAACCACATCAGTGGTTGTTCAATCAAATCAACCGGTCTGGTCTTGATTGTATGACCGCTGATGTGGCTGACTGCATTCAATCACGAGACTTTGA 530 0.4189 MRPVILWSVARLHGKPIDEVCILCVIVCVLLTAFISEFIGQHFAMGPILLGLVVPEGPPLGTSLIAKMETVTCGFLYPIYLAVSGLQTDVFKINIQSTWIVTIIVIAGFVVKIGGVMLPGYYYNVPMKECFMIGLLLNGRVTARCQPHQWLFNQINRSGLDCMTADVADCIQSRDF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55328g00001 176 PANTHER CATION/H + ANTIPORTER 1 138 - -
Trme55328g00001 176 Pfam Sodium/hydrogen exchanger family 6 141 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme55328g00001 176 Gene3D - 1 144 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55328g00001 Trme-Chr55328 1 830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55328g00001 1 137 Antiporter Super Family AT3G44910 37.589 4.30e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55328g00001 K26731 - psat:127104004 196.823