Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55311g00001 ATGATCTTGACAATGATTATGGGAATTTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTCAAGAACAAAGTTTCAACTGAGTATTTGAAGGAATTAGCCAACAACACTGATGTTCATAGAGTGCCTGGAATTGGACTTTTATATTCTGAGCTTGTACAAGGAATTCCGCCGATATTTCCACATTTTATAGCTAGTGTACCATCTATTCATTCGGTTGTCGTATTTGTTTCCATTAAGACGATTCCGGTTAGTAGAGTTGCATTGGAAGAAAGGTTTTTGTTTCGACAAGTTGAACCGAGGGAGTATAGAATATTTCGATGTGTTGCGAGGTTTGGATACAGTGATGTACTTGAGGATCCTTTAGAGTTTGAGTCACAATTAATGCAAAATCTCAAAGGATTCATTCAACAAGAGAATTTCATGCTTGAGGCTAATGATGGTACTAATACTAACAATGTAACAANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAATGAGAGTGATCAAATGGAAGATGTTTCAGCTAAAGAATTGAAACCAAGGTCTAATAATTCTTCAAGTAGAATCATCCCAAGTCTTGGTGCGTCTCATGTATCATCAGATTCGATAAGATCATTACCCGGAAGTGCGACAAAATCATCAAATTTCTATGCACCTATCTTCCAAGGACCAGAAGAGGAAATTAAGTTTATAGATAAAGCAATGGAAAAAGGTGTGGTGTATATGATAGGTGAAGCAGAAGTAGTAGCTCATCCAAATTCTTCCATTTTGAATAAGATTGTTGTCAA 797 0.345 MILTMIMGIWHYVHKERYMFELKNKVSTEYLKELANNTDVHRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVVFVSIKTIPVSRVALEERFLFRQVEPREYRIFRCVARFGYSDVLEDPLEFESQLMQNLKGFIQQENFMLEANDGTNTNNVTXXXXXXXXXXXNESDQMEDVSAKELKPRSNNSSSRIIPSLGASHVSSDSIRSLPGSATKSSNFYAPIFQGPEEEIKFIDKAMEKGVVYMIGEAEVVAHPNSSILNKIVV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55311g00001 265 Coils Coil 168 179 - -
Trme55311g00001 265 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 265 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme55311g00001 265 MobiDBLite consensus disorder prediction 147 175 - -
Trme55311g00001 265 Pfam K+ potassium transporter 1 117 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55311g00001 Trme-Chr55311 120 916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55311g00001 1 265 Inorganic Solute Cotransporters AT4G13420 40.892 2.17e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55311g00001 K03549 - gmx:100814313 335.109