Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55303g00001 ATGAAGGAAATTGCCAAAGATATTAAAGATTCGCTTACCGATATGATTAACAAACGAGAGATTGCACTAAAGGCGGGTGAATCAGCTAAGGATGATTTATTAGGCATACTTTTGGAGTCAAATCACAAGGAAAAGGAAGAACATGGCAACAATAAGAATGTCGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTACCCTGATTGGCAAGCGCGTGCAAGGGAGGAAGTAATACAAGTCTTCGGAAACAAAAAGCCAGATTTTGATGGACTAAGTCATCTTAAGATTGTAAGTATTGTGTTATTCCCTTCATAA 387 0.385 MKEIAKDIKDSLTDMINKREIALKAGESAKDDLLGILLESNHKEKEEHGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVIQVFGNKKPDFDGLSHLKIVSIVLFPS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55303g00001 128 PRINTS E-class P450 group I signature 60 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme55303g00001 128 PRINTS E-class P450 group I signature 80 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme55303g00001 128 SUPERFAMILY Cytochrome P450 2 125 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme55303g00001 128 Gene3D Cytochrome P450 1 125 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme55303g00001 128 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 125 - -
Trme55303g00001 128 Pfam Cytochrome P450 1 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55303g00001 Trme-Chr55303 374 760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55303g00001 1 126 Cytochrome P450 AT3G14680 62.698 3.10e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55303g00001 - - gmx:100780780 214.927