Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55250g00001 ATGAATACGGTTGAGAGTTGTCTTAGTGATGCTAAGATGAACAAGAATAGTCTGGACGATATTGTACTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGAACTTTTTTAAGGGTAAGGATTTGTGTATGAGCATCAACCCGGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGCTTTGCGAAGGCATTAAGAATGTTCCTAATTTGGTGCTGCGAGATGTTACGCCATTGTCACTTGGTCTATCAGTTAAAGGAAATCTTATGAATGTCGTGATTTCTAGGAACACGCCCATTCCTGTCAAGAAAACAAATACATACCATACAACATTTGATAACCAACGCAGCGTCAATATTGAGGTTTACGAGGGTGAGAGAATGAGAGCCAGTGATAACAACTTGCTTGGTTTCTTTAGTTTCTCTGTTCCTCCTGCTCCTAAGGGCCACATTCCTATCAAAGAAAGCTTTTCTATAGATTCTGATG 505 0.4158 MNTVESCLSDAKMNKNSLDDIVLVGGSSRIPKVQQLLQNFFKGKDLCMSINPDEAVAYGAAVQAALLCEGIKNVPNLVLRDVTPLSLGLSVKGNLMNVVISRNTPIPVKKTNTYHTTFDNQRSVNIEVYEGERMRASDNNLLGFFSFSVPPAPKGHIPIKESFSIDSD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55250g00001 168 Gene3D - 1 47 - -
Trme55250g00001 168 Gene3D - 48 65 - -
Trme55250g00001 168 PANTHER HEAT SHOCK PROTEIN 70KDA 1 167 IPR013126 GO:0005524|GO:0140662
Trme55250g00001 168 SUPERFAMILY Actin-like ATPase domain 2 67 IPR043129 -
Trme55250g00001 168 ProSitePatterns Heat shock hsp70 proteins family signature 3. 21 35 IPR018181 -
Trme55250g00001 168 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 69 168 IPR029047 -
Trme55250g00001 168 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 73 168 IPR029047 -
Trme55250g00001 168 PRINTS 70kDa heat shock protein signature 50 70 - -
Trme55250g00001 168 PRINTS 70kDa heat shock protein signature 76 95 - -
Trme55250g00001 168 PRINTS 70kDa heat shock protein signature 18 34 - -
Trme55250g00001 168 PRINTS 70kDa heat shock protein signature 156 168 - -
Trme55250g00001 168 Pfam Hsp70 protein 2 168 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55250g00001 Trme-Chr55250 32 536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55250g00001 1 168 Calmodulin-binding Proteins AT3G09440 63.529 7.05e-66 210