Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55242g00001 ATGGCGGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCTTATGATCTCTTCTGCATTTCCCTAGTCACAAAATTGTTAGGAAGAATCTATTACACAGATTACACCAAACCAAAGCCAGGTGTTCTTCCTCCAAGTGTACAAGCCGCGGTAACTGGTGTCGCGCTATGCGGCACTTTAGCCGGCCAACTGTTCTTCGGTTGGCTTGGTGACAAATTAGGAAGAAAAAAAGTTTATGGTATAACCCTTATGCTTATGGTAGGTTGTTCACTCGCCTCGGGTCTATCGTTTAGTAATAGTCCAAAGGGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCAGCCACAATTATGTCTGAATACGCCAACAAAAAGACGCGAGGCGCTTTCATTGCTGCTGTGTTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAATAGTTGCATTGATTGTAGCTACTGCTTTTGATCACAAATATAAAGTTCCTAGTTACGAAGAAAACGCGCACGCGTCACTTGTGTTACCAGCTTTTGATTACGTTTGGCGTATTATTCTAATGTTTGGTGCTGTTCCAGCAGCACTTACCTATTACTGGCGTATGAAGATGCCGGAGACGGCTCGTTACACGGCACTTGTTGCTAAGAATGCTAAACAAGCAGCTACTGATATGTCTAAGGTGTTACAAGTTGAA 792 0.4318 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYTKPKPGVLPPSVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVGCSLASGLSFSNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIVALIVATAFDHKYKVPSYEENAHASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAATDMSKVLQVE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55242g00001 264 Gene3D MFS general substrate transporter like domains 19 261 IPR036259 -
Trme55242g00001 264 Pfam Sugar (and other) transporter 24 255 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trme55242g00001 264 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 264 IPR020846 GO:0022857
Trme55242g00001 264 FunFam Probable inorganic phosphate transporter 1-5 19 256 - -
Trme55242g00001 264 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 262 - -
Trme55242g00001 264 SUPERFAMILY MFS general substrate transporter 11 245 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55242g00001 Trme-Chr55242 125 916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55242g00001 7 264 Inorganic Solute Cotransporters AT2G32830 82.946 3.30e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55242g00001 K08176 - gmx:100792177 470.7