Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55196g00001 GAAGCGACTAGTGCTCTAGATGCAGAGTCTGAGAAAAGTGTACAAGAAGCTCTTGATCGTGTCATGATTGGTAGAACAACTGTGATAGTGGCACACAGACTTTCAACCATTAGGAATGCAGATATGATAGCTGTTGTTGAACGAGGGAGCATTGTGGAAACTGGAAATCATGAAGAGCTCATTTCCAACTCAAATAGTGTATATGTATCTCTTGTTCAAGGCCACCCTTCTCCGGATCCTAGCTTGGGACAGTCATCAAGGTGCTTCATTCTCATCCATAATTACAATTAA 291 0.4192 EATSALDAESEKSVQEALDRVMIGRTTVIVAHRLSTIRNADMIAVVERGSIVETGNHEELISNSNSVYVSLVQGHPSPDPSLGQSSRCFILIHNYN 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55196g00001 96 PANTHER ABC TRANSPORTER B FAMILY 1 73 IPR039421 -
Trme55196g00001 96 Gene3D - 1 75 IPR027417 -
Trme55196g00001 96 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 73 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55196g00001 Trme-Chr55196 111 401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55196g00001 1 73 Calmodulin-binding Proteins AT2G36910 66.216 1.36e-27 102