Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme55034g00001 ATGATATGCTACCTTTTCTATATTTATTTTCTGCAGATTAACTTGAGGTGTTTGGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCCTTAAATGGCTTCGATCCTCCTAAAGCGGCAAAGCGCTCTCAAATCGTACAAGTACACTCAAAACAAGATGAAAATGGAGAGGATGAAAGCATTATAGAAGCAACAGATGAAGACAAGCAGCTATTGCAATCAGATATGAATACTGAAAACAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCATTAACAGAAGAAGGTGGTGTGGATCCTTCTTCAACTCAAGAAGCCTTACTTAAAGAAGCCATTCATGTCATGAGTTGTAGCTACGAAGACCGAACACTTTGGGGATACGAG 408 0.3799 MICYLFYIYFLQINLRCLDGIQGPVYIGSGCIFRRKALNGFDPPKAAKRSQIVQVHSKQDENGEDESIIEATDEDKQLLQSDMNTENKFGKSTLFMNSSLTEEGGVDPSSTQEALLKEAIHVMSCSYEDRTLWGYE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme55034g00001 136 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 135 - -
Trme55034g00001 136 Pfam Cellulose synthase 8 135 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme55034g00001 Trme-Chr55034 378 868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme55034g00001 10 136 Cell Wall Biosynthesis AT5G17420 48.936 5.49e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme55034g00001 K10999 - gmx:100777270 200.29