Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme550328g00001 ATGGGCGGAGATGATAATGTAGAGAAGAAGGAAGTGAAAGAGGAAGACTTGCATAAGTTTCCGTATCTGAAGTGTGTGATTTTGGAAGGGTTGAGGCGTCATCCACCGGCTCATTTAGTGTTGCCACATTCGGTGACCGAGGATGTTGTTTTGAATGGTTATTTGGTGCCTAAAAATGGGACAGTGAATTTTATGGTGGCTGAG 204 0.4412 MGGDDNVEKKEVKEEDLHKFPYLKCVILEGLRRHPPAHLVLPHSVTEDVVLNGYLVPKNGTVNFMVAE 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme550328g00001 68 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 68 - -
Trme550328g00001 68 Gene3D Cytochrome P450 3 67 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme550328g00001 68 Pfam Cytochrome P450 9 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme550328g00001 68 SUPERFAMILY Cytochrome P450 9 65 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme550328g00001 Trme-Chr550328 1 204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme550328g00001 8 68 Cytochrome P450 AT1G64940 73.770 8.87e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme550328g00001 K24184 - cave:132164191 109.768