Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme550273g00001 GCAAGTGTATTCGGCAATGGCAAAGGAACGGCAAGTGGTGGATCACCAAAAGCCCGAGTTGCAGCCTATAAGGTGTGTTGGCCACCCCTTGCCGTGGGTGGTGGATGTTACGAAGCAGACATTTTGGCTGCTTTTGAAGCCGCGATAAGTGACGGCGTTGATGTTCTTTCAGTGTCTTTGGGTGGCAATAACGTCGAATTTTTGGAAAGTGGTATTTCTATAGGGACTTTTCATGCAGTTGCCAAGGGCATTGTTGTA 258 0.4845 ASVFGNGKGTASGGSPKARVAAYKVCWPPLAVGGGCYEADILAAFEAAISDGVDVLSVSLGGNNVEFLESGISIGTFHAVAKGIVV 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme550273g00001 86 Gene3D Peptidase S8/S53 domain 1 86 IPR036852 GO:0004252|GO:0006508
Trme550273g00001 86 SUPERFAMILY Subtilisin-like 8 86 IPR036852 GO:0004252|GO:0006508
Trme550273g00001 86 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 86 IPR045051 -
Trme550273g00001 86 Pfam Subtilase family 6 65 IPR000209 GO:0006508|GO:0008236
Trme550273g00001 86 ProSiteProfiles Serine proteases, subtilase domain profile. 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme550273g00001 Trme-Chr550273 14 271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme550273g00001 2 86 Subtilisin-like Serine Gene Family AT2G04160 64.706 9.82e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme550273g00001 - - mdm:103447209 135.191