Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54980g00001 ATGCAGGAGGAAATTGATCGGGAGCAAGGTACTTCAATAGAGGTTATGCTGCCTATGCAGGGCCAAAGGCAATACAAAACAGTCGCACTCAACACTGTAATGGAACTGTCAATATTGGTGGTTATCCCAATTCTCGAAGCCAGAATTACTACGTACAAAGCCTGCTGGCCACCAATTAATGGCAGTGAATGTTTTGATGCTGATATCACGGCAGCCTTTGATATGGCTATTCATGATGGTGTTGATGTTCTTTCCCTCCCCCTTGAAGGTTCTGCTGCTCATTACTTTGACAATGGTCGTGCATTTCATACTGTTAAAAGGGAATCCTAG 330 0.4394 MQEEIDREQGTSIEVMLPMQGQRQYKTVALNTVMELSILVVIPILEARITTYKACWPPINGSECFDADITAAFDMAIHDGVDVLSLPLEGSAAHYFDNGRAFHTVKRES 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54980g00001 109 Gene3D Peptidase S8/S53 domain 46 101 IPR036852 GO:0004252|GO:0006508
Trme54980g00001 109 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 106 IPR045051 -
Trme54980g00001 109 SUPERFAMILY Subtilisin-like 46 94 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54980g00001 Trme-Chr54980 399 815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54980g00001 47 107 Subtilisin-like Serine Gene Family AT2G04160 51.562 5.10e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54980g00001 - - gmx:100808488 93.9745