Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme549418g00001 ATGGAAATTGAGCTGAGGCACTTGAAGGGAGAGAACATTACCTCAATGAATTTGAAAGAGCTCATGGCCCTTGAGAGTTCCCTTGAAAATGGCCTTACCTGTGTTCGCGACAAAAAGATGGAAGTGTATAGGATGGTCAAGAGAAATG 148 0.4324 MEIELRHLKGENITSMNLKELMALESSLENGLTCVRDKKMEVYRMVKRN 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme549418g00001 49 Pfam K-box region 2 43 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trme549418g00001 49 ProSiteProfiles K-box domain profile. 1 49 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme549418g00001 Trme-Chr549418 16 163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme549418g00001 1 46 MADS-box Gene Family AT5G20240 50.000 3.91e-11 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme549418g00001 K09264 - gmx:100306010 78.5666