Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme54881g00001 | CAATCACTTGACTTCAGCAGCATCAATGCTATTACAGTTTTGAAATTGTTCGGGACCTTCCTTTATCTCTTTTGCACTAGTACTGCCCTTGGCATAGCAGTTGGMCTTTTAAGTGCTTATATTATTAAAACACTTTACTTTGGAAGGCACTCTACTGATCGCGAAGTTGCACTTATGATGTTGATGGCATATTTGTCATATATGATCGCTGAGAGGGTTAGAGGATAA | 228 | 0.386 | QSLDFSSINAITVLKLFGTFLYLFCTSTALGIAVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAERVRG | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme54881g00001 | 75 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 72 | IPR018422 | GO:0006812|GO:0015385|GO:0016020|GO:1902600 | |
| Trme54881g00001 | 75 | Pfam | Sodium/hydrogen exchanger family | 10 | 73 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme54881g00001 | 1 | 71 | Antiporters | AT3G05030 | 66.197 | 3.14e-27 | 100 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme54881g00001 | K14724 | - | tss:122660255 | 120.553 |