Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54766g00001 ATGGTTTGTGAGATGGAAAGTGATTGTATTGAAGACATGATGGACATTGAAGTTCTATCATCAATGTGGCCAGAAGATGTTGGAACTGATGTTGGAAAACAGTTCAACATCGAAAAACCAGGAAGAGATCAAGATATGTTGGAAGAAGTAACAATCTTAGAAGAACCAGCTATAGCTGATTTTCAAAGATTAATGGAGTTAACAAATTATACTGATAAAGGGTCATCTCAATTGGCTTATTTAATGCAACATTGGGAGTATAAACAAGCGAACGCGGTTCGACTTCTTCGAGAAGAGCTTGACAACCTTAGTAAACAAAGGAAGGAAGTTGAGCTAAGAAAATTGGAGATAATTAAAGATAATAACCGGTTCGAGGAAGAGAGTTACGCGGGAGATAAACGTCCGGTTTCGATATTAGATGATGCTTACTATACATGGCAAGATCTACCNNNNNNNNNNANNNNNNNNAGTGATGTTGTTGTTGAAAACAAGAGAGTTGAAATTGAAGCTGAGTATGATACTGTTGTTTATTGGAAACATCGGTCGCAAGATTTGGAAAAACAGTTGGAGGCGAGTATTCGGAGAGAGGAGATATTGAAGGAAAAGTTGCAAGAAAGTATTGAGACTATTGAAAGACAATCCTCACCTGTGGAAGAATTGTCACAGATTCTTAAGAGAGCAGATAATTTCTTACATTTTATACTTCAAAATGCACCTGTTGTTATTGGCCATCAGGTATATTACAGTGAGTATTGA 756 0.3598 MVCEMESDCIEDMMDIEVLSSMWPEDVGTDVGKQFNIEKPGRDQDMLEEVTILEEPAIADFQRLMELTNYTDKGSSQLAYLMQHWEYKQANAVRLLREELDNLSKQRKEVELRKLEIIKDNNRFEEESYAGDKRPVSILDDAYYTWQDLPXXXXXXSDVVVENKRVEIEAEYDTVVYWKHRSQDLEKQLEASIRREEILKEKLQESIETIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQVYYSEY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54766g00001 251 Coils Coil 182 213 - -
Trme54766g00001 251 Coils Coil 93 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54766g00001 Trme-Chr54766 126 881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54766g00001 1 245 Histidine Kinase Gene Family AT5G10720 54.694 3.99e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54766g00001 - - cam:101512841 434.491