Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54761g00001 GGAGGGTATATTCCCATTTCGGAAGCAGATGCCCATGCCTTTGCAGCTTATGTGCAGGATGTGAAACAAAAGTCTGAAGAAATCTTTGTTTCATTCAAAAAACTATGTGAATCAAACACGATAGAAACCTTTCTGCTAGAAGATGACAATCCTGCAAATGCACTTCTTAGCTTTATCTCGGAGTCTGGGGTTCAAATATTAGTGCTGGGTTCCGATGATTCAAATTTTATTACAAGGAAGCTAAAAGGACCTGGCATACCGACTACCATTCTAAGATGTGCTCCTGACAGCTGTGATGTATATGTTGTTGATAGAGATAGAATTGTATCAAAGTTAGCTGATTCTTCATCTT 352 0.3892 GGYIPISEADAHAFAAYVQDVKQKSEEIFVSFKKLCESNTIETFLLEDDNPANALLSFISESGVQILVLGSDDSNFITRKLKGPGIPTTILRCAPDSCDVYVVDRDRIVSKLADSSS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54761g00001 117 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 2 111 - -
Trme54761g00001 117 Gene3D HUPs 3 106 IPR014729 -
Trme54761g00001 117 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54761g00001 1 117 Plant U-box Gene Family AT5G57035 47.541 3.35e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54761g00001 - - gmx:100805896 189.504