Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54749g00001 ATCGGGACAGCATTTGCGTTAAATATGCTCTTCAACATACCTGTTTGGATTGGTGTGTTACTGACTGGACTCAGCACATTGATGCTCTTAGCATTACAACAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTTGTGTTTACAATTGCTGCGTGTTTTTGGGCTGAGCTTGGATATGCAAAGCCTGATGCTAAAGAAGTTGTGAAGGGTCTTTTTGTGCCACAACTAAAAGGGAGTGGTGCTACTGGCCTTGCAATTTCACTCCTCGGTGCTATGGTTATGCCGCACAATCTCTTCCTGCACTCGGCACTGGTACTCTCTAGGAAAATACCACGATCAGTTCGCGGAATCAAAGTAATCATTTAA 372 0.4301 IGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVFTIAACFWAELGYAKPDAKEVVKGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKVII 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54749g00001 123 Pfam Natural resistance-associated macrophage protein 1 115 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme54749g00001 123 PRINTS Natural resistance-associated macrophage protein signature 87 110 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme54749g00001 123 PRINTS Natural resistance-associated macrophage protein signature 12 31 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme54749g00001 123 PRINTS Natural resistance-associated macrophage protein signature 37 58 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme54749g00001 123 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 119 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54749g00001 Trme-Chr54749 265 828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54749g00001 1 120 Inorganic Solute Cotransporters AT1G15960 90.000 2.77e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54749g00001 K21398 - gmx:100797298 207.223