Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme546702g00001 ATGGCAAGAAAAAGCACAAGACAGATCAGATCTGATGACAGTGGTTTTGATCTCATCACCGATGGGAATGGCAAGAAGAAGCTCAAGATCGATGCCTCGTTTGATTCCCGGAAAACCTCCGCCAGCATCAATACTGCCCTTAGTCACGTTGAGAATCTCATCAGAGGTGTTACCAAGGGATTCCGCTACAAAGATGAG 198 0.4646 MARKSTRQIRSDDSGFDLITDGNGKKKLKIDASFDSRKTSASINTALSHVENLIRGVTKGFRYKDE 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme546702g00001 66 Gene3D - 3 62 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Trme546702g00001 66 SUPERFAMILY Ribosomal protein L6 17 60 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme546702g00001 4 64 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 62.903 7.86e-18 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme546702g00001 K02940 - gmx:100306058 81.6481