Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54636g00001 ATGAAGTTTCCAGCTGCATCTTTCACTGGGTTGCCAGTTTTATCTGAGTCGGGGTTTGACTTGCTGAATAAGCTTCTAGCTTATGATCCTGAAAAGAGGATATCTGCTGAAGCTGCTCTGCAACATGATTGGTTTCGTGAAGGTCCACTTCCCCGATCTGATTTCAATCCAATTTTTTCCTCGTGGTAG 189 0.4392 MKFPAASFTGLPVLSESGFDLLNKLLAYDPEKRISAEAALQHDWFREGPLPRSDFNPIFSSW 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54636g00001 62 Gene3D Transferase(Phosphotransferase) domain 1 1 51 - -
Trme54636g00001 62 SUPERFAMILY Protein kinase-like (PK-like) 10 50 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54636g00001 4 49 Core Cell Cycle Gene Families AT1G20930 47.826 6.74e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54636g00001 K08818 - gmx:100814438 106.686