Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54616g00001 ATGGACAGGCCAATTTTAGAGCCAAGTAAGGTGAAAGGTACATCAAAGGGGAAGAAGAAACTAAAGGAAKKTCTTCAGAAAGCAGATGCTTCTGGGTCAACAGCTGATCTGTATAACGCGTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCAGAGACTTCTGGAAATTTGAAGCAGCTGCCTATGGATGCTGCTCAGCCAGCTGCAGTTGCAAATGAACAATGTGGGCAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGCCGCCGATATGTCCACACCTAAGCTAGAAGTATCAGATAAAACTCAACAGGACAGCAACGGAAGTGAAGTTACTGGCAAAAAGTACTCTCGAGATTTCCTTTTAAAATTTGCAGAGCAGTGCTCTGAGCTTCCCNNNNNNTNNNNNNNNNNGGCAGACATAGCTGAAGCTTTGATGGGTTCGAATATTGGTTCTCATGTTATGGTACGCGACACACATCCTTCTCCTGGAAGAAATACAGATAGGTCAGGTGGGATGTCTCGGATAGATCGTCGTGGGAATGGTGTTATTGAGGATGATAAATGGAGTAAAGTTCCTGGTGCTTTTCATTATGATATGCGTTTGGATGGTAATGTAGGTAATACAGGATTCCGACCTGCACAAGGTGGCAATGCTGGTGTTTTAAGGAATCCACGCCCACAAGGAACTGTGCAGTATGGTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGTACATCAAGGAGGAATGCTAAGAAATAGCCCTGATGGCGAAAGGTGGCAGCGTGCTACTAACTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCT 840 0.4464 MDRPILEPSKVKGTSKGKKKLKEXLQKADASGSTADLYNAYKGPEEKKEAVASSETSGNLKQLPMDAAQPAAVANEQCGQSKAELEDWEDAADMSTPKLEVSDKTQQDSNGSEVTGKKYSRDFLLKFAEQCSELPXXXXXXADIAEALMGSNIGSHVMVRDTHPSPGRNTDRSGGMSRIDRRGNGVIEDDKWSKVPGAFHYDMRLDGNVGNTGFRPAQGGNAGVLRNPRPQGTVQYGGGILSGPMQSMVHQGGMLRNSPDGERWQRATNFQQRGLIPSPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54616g00001 280 MobiDBLite consensus disorder prediction 99 115 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 1 26 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 174 188 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 155 188 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 250 280 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 212 232 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 82 97 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 262 280 - -
Trme54616g00001 280 MobiDBLite consensus disorder prediction 1 115 - -
Trme54616g00001 280 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 7 276 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54616g00001 Trme-Chr54616 1 840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54616g00001 14 279 Eukaryotic Initiation Factors Gene Family AT3G60240 51.273 1.02e-72 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54616g00001 K03260 - gmx:100790680 382.489