Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5458g00001 ATGAAGCGCAAAGAGCAGCTTCAGAGGCATATGAAAAAATGTGATCTTAAGCATCCCCCTGGCGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGAAAAACATTCTGAGGAATCTTACAATCTGGCATGTATCCTCACCCTTCCACCTTATCAAAGGAAAGGTTATGGAAAATTTCTAATTGCTTTCTCATATGAACTTTCAAAGAAGGAAGGAAAAGTTGGCACTCCTGAAAGACCCCTTTCAGATCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTTTTAGACATTCTGAAAAAGCATAAGGGAAACATTTCCATCAAG 339 0.4012 MKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5458g00001 113 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 1 113 IPR002717 GO:0004402|GO:0006355|GO:0016573
Trme5458g00001 113 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 108 IPR016181 -
Trme5458g00001 113 Gene3D - 35 82 - -
Trme5458g00001 113 PANTHER HISTONE ACETYLTRANSFERASE 1 34 - -
Trme5458g00001 113 CDD NAT_SF 28 74 - -
Trme5458g00001 113 Pfam MOZ/SAS family 35 112 IPR002717 GO:0004402|GO:0006355|GO:0016573
Trme5458g00001 113 Gene3D - 83 113 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5458g00001 Trme-Chr5458 287 2057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5458g00001 1 113 C2H2 Transcription Factor Family AT5G64610 61.078 1.36e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5458g00001 K11308 - msin:131222730 189.889