Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme54589g00001 | ATGAACGAACGTAGCAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCATGGAAAGAACTTGATATCAGGAGGCATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGTGAGAGGGCCGATAAAACCGAGGCCACAGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGAGATGTAATCGCTTCCCTTGCGCAGAAGAATGCACATGTTCCATACCGGAACAGTAAACTTACTCAGCTACTTCAGGATGCACTTGGAGGGCAGGCCAAGACTCTCATGTTTGTTCATATTAGTCCGGAACCTGATGCTCTTGGAGAAACACTAAGTACACTCAAGTTCGCAGAACGCGTATCCACCGTTGAACTAGGAGCTGCAAAAGTAAATAAAGATAACACAGAAGTGAAAGACCTTAAAGAACAGGTTCTTACATTGTCTTTTGTTCTCTAG | 474 | 0.4367 | MNERSSRSHSCLTVHVHGKNLISGGIIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAAKVNKDNTEVKDLKEQVLTLSFVL | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme54589g00001 | 157 | ProSitePatterns | Kinesin motor domain signature. | 29 | 40 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Trme54589g00001 | 157 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain | 65 | 148 | - | - | |
Trme54589g00001 | 157 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 1 | 153 | IPR027640 | GO:0003777|GO:0007018 | |
Trme54589g00001 | 157 | SMART | kinesin_4 | 1 | 137 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trme54589g00001 | 157 | Gene3D | Kinesin motor domain | 1 | 156 | IPR036961 | - | |
Trme54589g00001 | 157 | ProSiteProfiles | Kinesin motor domain profile. | 1 | 129 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trme54589g00001 | 157 | PRINTS | Kinesin heavy chain signature | 30 | 48 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trme54589g00001 | 157 | PRINTS | Kinesin heavy chain signature | 79 | 100 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trme54589g00001 | 157 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 154 | IPR027417 | - | |
Trme54589g00001 | 157 | Pfam | Kinesin motor domain | 1 | 128 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme54589g00001 | Trme-Chr54589 | 169 | 829 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme54589g00001 | 1 | 129 | Calmodulin-binding Proteins | AT5G65930 | 55.814 | 1.46e-40 | 142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme54589g00001 | K10406 | - | gmx:100799535 | 274.248 |