Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54566g00001 ATGAATACATTTATGGATTCAAGGGAAAATAATAAGTCATCAGAAGAAGTTGAAAGGTGTTTAGATCCTCAGCTATGGCATGCTTGTGCAGGTGGAATGGTTCAGATGCCAACAGTGAACAGTAAAGTTTATTACTTTCCTCAAGGTCATGCTGAACATGCATGTGGACCTGTTAACTTCATGAATTGTCCAAAAGTTTCACCTTTGATTCCATGCAAAGTTGTTTCTATTAAGTACATGGCTGATCCTGAAACAGATGAGGTTTATGCAAAGCTTAAGCTTTTTCCTTTGAGTGGAAATGGAAATGATGGTCAAGATTATTATGGCAATGATGTTGTTGAAAATCAAGACAAGCCTGTTTCATTTGCAAAGACATTGACTCAATCTGATGCTAACAATGGTGGAGGTTTTTCT 414 0.3696 MNTFMDSRENNKSSEEVERCLDPQLWHACAGGMVQMPTVNSKVYYFPQGHAEHACGPVNFMNCPKVSPLIPCKVVSIKYMADPETDEVYAKLKLFPLSGNGNDGQDYYGNDVVENQDKPVSFAKTLTQSDANNGGGFS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54566g00001 138 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 138 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54566g00001 Trme-Chr54566 508 921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54566g00001 16 138 B3 DNA Binding Superfamily AT2G28350 57.778 3.01e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54566g00001 - - gmx:100796522 210.69