Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54564g00001 ATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAGGCAGAGAGAAGAAAAGCTGCCCTTGAGAAGGCACATGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTAGCTGCTTCAAGCAAGGGGCTTTCGTCAATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGAATCATTTAGGGGTTCACTGTGTGTTTTCCCACCCGAGAATGTAAAGCTGAGAAAACCATTTGCTATCCAACCATGGATCAACTCAGAAGAGAATGTTGGCAACCTTCTCATGTTTATACTTGATTTGAGGCTTCTGATTCAAGGTTTGAAAGCTGTGGTGGTCTATTTCAG 374 0.4171 MRQKEELRKEKEAERRKAALEKAHARKIAKESMELIEDEQLEMMELAASSKGLSSIIRLDFDTLQNIESFRGSLCVFPPENVKLRKPFAIQPWINSEENVGNLLMFILDLRLLIQGLKAVVVYF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54564g00001 124 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 106 IPR044977 GO:0006357
Trme54564g00001 124 Coils Coil 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54564g00001 Trme-Chr54564 53 790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54564g00001 2 105 Homeobox Transcription Factor Family AT1G28420 66.346 5.54e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54564g00001 - - adu:107480767 157.918