Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54520g00001 CTGCAACTACAGCAACTAATGGAGACATTAAACTCAACGGAGCCTCATTATGTTAGATGTGTGAAACCAAATAACCTCCTCAAGCCTGCAATTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGGATTAGTTGTGCTGGGTACCCAACTCGCCGTGCTTTCTTTGAGTTTATAAACCGATTTTCCCTCCTTGCCCCAGAGGCCACAGAAGCAAACAATGATGAGAAGGCTGTTTGCCAAAAGATTCTAGAAAAGATGGAGCTTAAAGGATATCAGGTACTTTGA 312 0.4199 MQLQQLMETLNSTEPHYVRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEATEANNDEKAVCQKILEKMELKGYQVL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54520g00001 103 Gene3D - 57 102 - -
Trme54520g00001 103 PANTHER MYOSIN 2 102 - -
Trme54520g00001 103 Gene3D Kinesin motor domain 1 56 IPR036961 -
Trme54520g00001 103 Pfam Myosin head (motor domain) 2 98 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme54520g00001 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 99 IPR027417 -
Trme54520g00001 103 ProSiteProfiles Myosin motor domain profile. 1 103 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54520g00001 Trme-Chr54520 195 737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54520g00001 1 102 Myosins gene family AT1G08730 83.333 4.70e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54520g00001 K10357 - jre:108990737 187.193