Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54471g00001 TTGGCAGATTCTGTAGAGCAGATCCTACCAGGTATCTTTGGTCGAGCCGAGAGGTGGTACTTTCTCGCTCTTTGTTACAGCGCTGCAGGACAGAATGAAGCAGCGTTAAACCTTTTGAGAAAAGCTTGTGGTAGTTCTGAGTCAGAGCATATACCTCATTTTGCTTCATATTTGTTTGGTGCAAAACTGTGTTCCCAAAATCCAATTCATGCTCATGAAGGCATCAAATTTTCAAAGCAAGTTATTGATCTAGCCAAGCATCGAAATGAGCATTTTTTGGTTCAAGGCCAACAAATTHTCGGTGTTTGTTACGGGGCTGCAGCTAGAACATCTGTAGTGGATTCTGAAAGAATTRTATTTCAAAAAGAGTCTTTGGACTTTCTAAACGAAGCTGCTCTAACTGGAAGCGATGATGCAGAAGTGATGTTCAGTCTTGGACTGGAAAACGCAGTTCAGAGGAATCTAGATGCAGCTTATCAAAACATAATGAGGTACTCAGATATGATAGCTGGAAGTTCTACAAGAGGTTGGGAGCTATTAGCGCTCATCGTATCCGCACAACAGAGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGATGACGCTGGTAGCGTAGATCAGTTAGAACTACTAAGACTCAAAGCTGTACTTCAAATTGCTCAGCAGCAACCAAAGCAAGCTATAGAGACCTACAGAACCTTGTTAACAGTAATAGCAGCCAAAAAGGAGCTTTTGCTTCAAGCTAAGAACTCTGAGTTTGATCAAGCAAAAATATTCAAGGATGAGGTATGTTTTAGTTACTTTTGA 813 0.4047 MADSVEQILPGIFGRAERWYFLALCYSAAGQNEAALNLLRKACGSSESEHIPHFASYLFGAKLCSQNPIHAHEGIKFSKQVIDLAKHRNEHFLVQGQQIXGVCYGAAARTSVVDSERIXFQKESLDFLNEAALTGSDDAEVMFSLGLENAVQRNLDAAYQNIMRYSDMIAGSSTRGWELLALIVSAQQRFKDAETIVDFALDDAGSVDQLELLRLKAVLQIAQQQPKQAIETYRTLLTVIAAKKELLLQAKNSEFDQAKIFKDEVCFSYF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54471g00001 270 SUPERFAMILY TPR-like 14 241 IPR011990 GO:0005515
Trme54471g00001 270 Gene3D Tetratricopeptide repeat domain 4 259 IPR011990 GO:0005515
Trme54471g00001 270 PANTHER PROTEIN NPG1 1 254 IPR043376 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54471g00001 1 245 Calmodulin-binding Proteins AT1G27460 53.036 6.94e-91 281