Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54375g00001 GAAAGGAAAGCCATCAATTCAGAGTTATGGCATGCTTGTGCCGGGCCGTTGGTTTCTATACCTCCCGTTGGAAGTCTTGTTGTTTACTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCAGATTTCATACCAAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCGCTACATGGTCTAACACCGGCACATGTGGTTACTGGTTACATTCAATCACTTTCATTTTCTTAA 264 0.4394 ERKAINSELWHACAGPLVSIPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHGLTPAHVVTGYIQSLSFS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54375g00001 87 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 69 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54375g00001 Trme-Chr54375 322 834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54375g00001 1 69 B3 DNA Binding Superfamily AT5G20730 86.957 2.69e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54375g00001 K14486 - lja:Lj6g3v1174050.1 144.05