Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5435g00001 AAAAGACCTAGGGATTTATTAAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGCAAGAAAGAATCTCGCGAGATCAGTGCTTTATTTGGTGTAACAGTAACACAGGTGCGTGACTATTTCACTAGTCAACGTTCAAGAGTGAGGAAACAAGTTCAGTTGTCGAAGGAGAGGGCATTAAAATCTAATTCTTGTGCGGAATCTCTTGATGTGCAAATAAACTCTGATCCCGTGAGATCAATGAATCCAGCTCCCTTAAACTCTGTTGGTGCCACCAACGTGGAAGAAGCATCCTATTCCGCACAGGAAGCAGCTCTTTCTGACCTAGATGACTCAGATAAACAATTTGTTGAGAACATTTTTGGTCTAATGCAGAAAGAGGAAACATTTTGTGGCCAGGAGAAATTGTTGGAGTGGATATTGACAATACATAATTTTTCAGTCTTATTGTGGTTTTTGACCGGAGGAGGTGCAATGACTTTAGCAAATTGGTTGAGTAAAGCCGCCGTTGAAGAGCAAACGAGTGTGCTGCTTCTTGTCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCATCCTGCCCATATATCAGCTTTATTGCAGAGTGTTAATAGACTGCGGTTCTACAGGACATCAGATTGTACCTTGATGGCAAGCGTTTGA 687 0.4032 KRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDYFTSQRSRVRKQVQLSKERALKSNSCAESLDVQINSDPVRSMNPAPLNSVGATNVEEASYSAQEAALSDLDDSDKQFVENIFGLMQKEETFCGQEKLLEWILTIHNFSVLLWFLTGGGAMTLANWLSKAAVEEQTSVLLLVLKVLCHLPLHKAHPAHISALLQSVNRLRFYRTSDCTLMASV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5435g00001 228 Gene3D - 1 69 - -
Trme5435g00001 228 SMART HOX_1 1 62 IPR001356 GO:0003677
Trme5435g00001 228 SUPERFAMILY Homeodomain-like 1 62 IPR009057 -
Trme5435g00001 228 ProSiteProfiles 'Homeobox' domain profile. 1 58 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5435g00001 1 223 Homeobox Transcription Factor Family AT4G02560 59.307 1.58e-87 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5435g00001 - - gmx:100780237 347.821