Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54295g00001 GTTTTTCCTCTGTTGATCCAAAAATTGTCTACTAAAGAACAAGCCTCACTTGTGTGGCAGTTCATATGTAGTGTTCCTATAATGTTGCTGGAAGAAATTTTGCCATGGATGGTATCTTTCCTTTCAGCAGATAAACAAGCAGAAGTTACTCAGTGTTTTAATGAAATTGCACCAATGGAAAGAGCACTGCAAGAGGTTTTGGTTTCTTGGCTTGGAAGCAACAAACAAACCTTCACTGAGACATATTTTCAGAGTGAAGAACTTCAAGGCTCTCATGGATTCCTACGTATAGAAAGATCATCTGGGCCGAGTTCTTGCAATGAGAACTCCAAAGAAATTTCAAGTCAGAGGAAAGTGAATGGCAAAGAAACAGAAGATGGGGTGAACCAAGTTAAAGTTCTTCATCTTTGGCATAATGCCATCAAGAAAGATTTGAAAGAAATTCAGCAAGAACTTTATCTAATGAGAAGTTCCAGCTGTTTTCAAAATTTAGACTCAATACTTATCCAACTAAAATTCTTGGCCGATGTCCTCGTCTTTTACAAGTAA 549 0.3752 VFPLLIQKLSTKEQASLVWQFICSVPIMLLEEILPWMVSFLSADKQAEVTQCFNEIAPMERALQEVLVSWLGSNKQTFTETYFQSEELQGSHGFLRIERSSGPSSCNENSKEISSQRKVNGKETEDGVNQVKVLHLWHNAIKKDLKEIQQELYLMRSSSCFQNLDSILIQLKFLADVLVFYK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54295g00001 182 MobiDBLite consensus disorder prediction 100 114 - -
Trme54295g00001 182 MobiDBLite consensus disorder prediction 100 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54295g00001 Trme-Chr54295 160 785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54295g00001 1 77 C2H2 Transcription Factor Family AT3G18290 28.205 9.85e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54295g00001 K16276 - gmx:100802706 290.812