Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme54263g00001 GTATATTTGCAGAGTGTTCCAACCCATGGAGTGGCTGCTGGATTGAACCCTATTGCAGGATTAGTGTTTGAGATTATTATAACATTTGGGTTGGTTTACACAGTTTATGCCACAGCAGCTGACCCCAAAAAGGGTTCATTGGGCACCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCCAACATCTTAGCGGCCGGTCCATTCAGTGGCGGTTCAATGAACCCGGCTCGCTCATTCGGTCCAGCTGTGGTTAGTGGAAACTTTGCTGATAACTGGATCTACTGGGTTGGTCCTTTGATAGGAGGAGGCTTGGCTGGGTTGATTTATGGTGACATCTTCATTGGTTCATATGCCCCAGCACCATCAACTGAAACATACCCTTAA 387 0.4755 VYLQSVPTHGVAAGLNPIAGLVFEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDIFIGSYAPAPSTETYP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme54263g00001 128 SUPERFAMILY Aquaporin-like 9 116 IPR023271 -
Trme54263g00001 128 Gene3D Glycerol uptake facilitator protein. 2 119 IPR023271 -
Trme54263g00001 128 PANTHER AQUAPORIN-8 5 116 IPR034294 -
Trme54263g00001 128 Pfam Major intrinsic protein 11 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme54263g00001 128 PRINTS Major intrinsic protein family signature 23 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme54263g00001 128 PRINTS Major intrinsic protein family signature 93 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme54263g00001 128 PRINTS Major intrinsic protein family signature 56 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme54263g00001 Trme-Chr54263 537 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme54263g00001 4 128 Major Intrinsic Protein MIP AT4G17340 84.800 9.61e-73 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme54263g00001 K09873 - fve:101300912 214.927